Digital Systems Medicine and Organ Crosstalk

The SchneiderLab studies the complex crosstalk between organs such as the liver, gut, brain, and the immune system. Our vision is to uncover new therapies against chronic inflammatory gastrointestinal and liver disease by targeting circuits of organ communication.

TEAM

Our research group is based at the Center for Regenerative Therapies Dresden (CRTD) and the Else Kröner Fresenius Center (EKFZ) for Digital Health.

Portrait Image Kai Markus Schneider, (C) Andreas Schmitter

Kai Markus Schneider

Prof. Dr. med. Dr. rer. nat.

Schneider Lab

Dresden’s university medicine offers excellent conditions for combining research, teaching and clinical work. I want to fulfill a central bridging function between patient-oriented care and excellent research. This unique position allows me to integrate the latest scientific findings into clinical practice and, conversely, to derive important research questions from daily work with patients. Ultimately, we want to improve the quality of life of people with liver disease by closing the gap between the lab and the clinic, efficiently translating research findings into therapies.

Digital Systems Medicine and Organ Crosstalk

Many human diseases result from complex interactions between different organs and cellular systems, which traditional organ-focused models often fail to fully capture. Our interdisciplinary and international team of researchers is dedicated to developing innovative therapies for gastrointestinal (GI) diseases by decoding the molecular circuits involved in organ crosstalk.

We focus on the gut-liver axis in liver diseases, including non-alcoholic fatty liver, acute liver failure, and cholestatic liver diseases. In addition, we study how neuro-immune communication within the GI tract controls complex processes such as inflammation and carcinogenesis. By leveraging state-of-the-art imaging and advanced multi-omics technologies, we dissect the complex crosstalk between different cellular systems.

Z-projection of a confocal whole mount of the myenteric plexus within the enteric nervous system. Enteric neurons are shown in red and glia cells in green.

From Basic Research to Clinical Translation

Our research includes work in animal models as well as clinical applications enabling us to translate our findings from bench to bedside. We apply a wide range of technologies in our research, including flow cytometry, single-cell RNA sequencing, shotgun metagenomic sequencing, metabolomic analyses, and analyses from large patient cohorts such as the UK Biobank, and Penn Medicine Biobank). Additionally, artificial intelligence plays a key role in our research efforts.

By studying GI diseases from the perspective of organ and cellular crosstalk, we aim to identify novel principles of disease mechanisms and therapeutic targets. Our team’s diverse expertise, ranging from molecular biology and immunology to bioinformatics, data science, and clinical medicine, fosters a dynamic environment for scientific exchange. This allows us to address research questions from different angles and to develop innovative solutions.

Recent publications

Kai Markus Schneider, et al., The enteric nervous system relays psychological stress to intestinal inflammation, Cell, Volume 186, Issue 13, 2023, Pages 2823-2838.e20, https://doi.org/10.1016/j.cell.2023.05.001.

Gui, W., Hole, M.J., Molinaro, A. et al. Colitis ameliorates cholestatic liver disease via suppression of bile acid synthesis. Nat Commun 14, 3304 (2023). https://doi.org/10.1038/s41467-023-38840-8

Schneider, K.M., Mohs, A., Gui, W. et al. Imbalanced gut microbiota fuels hepatocellular carcinoma development by shaping the hepatic inflammatory microenvironment. Nat Commun 13, 3964 (2022). https://doi.org/10.1038/s41467-022-31312-5

Schneider KM, Candels LS, Hov JR, Myllys M, Hassan R, Schneider CV, Wahlström A, Mohs A, Zühlke S, Liao L, Elfers C, Kilic K, Henricsson M, Molinaro A, Hatting M, Zaza A, Drasdo D, Frissen M, Devlin AS, Gálvez EJC, Strowig T, Karlsen TH, Hengstler JG, Marschall HU, Ghallab A, Schneider, K.M., Candels, L.S., Hov, J.R. et al. Gut microbiota depletion exacerbates cholestatic liver injury via loss of FXR signalling. Nat Metab 3, 1228–1241 (2021). https://doi.org/10.1038/s42255-021-00452-1

Contact

Prof. Kai Markus Schneider

Professor of Molecular Gastroenterology and Hepatology, TUD Dresden University of Technology
Research Group Leader at CRTD and EKFZ for Digital Health
Physician, Specialist in Internal Medicine, Medical Clinic and Polyclinic I of University Hospital Carl Gustav Carus Dresden
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